CShell 2.0

What's new


Hackathon 2012 @ Microscopes Workshop

Get familiar with CIShell

  1. CIShell Basics
  2. Setting Up the Development Environment
  3. Tutorial 1: Developing a Single Plugin
  4. Tutorial 2: Manipulate Tabular Data
  5. Tutorial 3: Practical Java Algorithm Development
  6. Tutorial 4: Integrating a Non-Java Program As An Algorithm
  7. Tutorial 5: Integrating 3rd-party libraries
  8. Supported Data Formats
  9. Existing CIShell Algorithms documentation

Extensive CIShell development

  1. Eclipse development setup for CIShell and Sci2
  2. Check out CIShell source and run Maven build
  3. Quick Start
  4. Using Maven with a Hello World Plugin for CIShell
Source Code Repositories


If you are interested with Sci2 algorithms, you should also use the following SVN repository. It contains the 181 algorithms from NWB, Sci2, and Epic tools.